Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-serine/d-alanine/glycine transporter | CI641_014595 | Not Available | Positive | 3038708 - 3040120 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | CI641_014600 | Not Available | Negative | 3040165 - 3040827 | 24884.1 |
| dmt family transporter | CI641_014605 | Not Available | Negative | 3040935 - 3041900 | 35279.7 |
| nad(p)h:quinone oxidoreductase | CI641_014610 | Not Available | Negative | 3042009 - 3042869 | 29779.2 |
| winged helix-turn-helix transcriptional regulator | CI641_014615 | Not Available | Positive | 3042958 - 3043338 | 14076.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | CI641_014620 | Not Available | Negative | 3043467 - 3045410 | 70866.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | CI641_014625 | Not Available | Positive | 3045600 - 3046340 | 27191.4 |
| ytfj family protein | CI641_014630 | Not Available | Negative | 3046330 - 3046887 | 20617.9 |
| duf1107 domain-containing protein | CI641_014635 | Not Available | Positive | 3047212 - 3047418 | 8072.24 |
| hlyc/corc family transporter | CI641_014640 | Not Available | Negative | 3047480 - 3048823 | 49783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





