Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stationary-phase-induced ribosome-associated protein | CI641_000195 | Not Available | Negative | 37123 - 37260 | 5096.13 |
| biofilm-dependent modulation protein | CI641_000200 | Not Available | Negative | 37362 - 37577 | 7988.24 |
| peroxiredoxin osmc | CI641_000205 | Not Available | Positive | 37923 - 38354 | 15089.0 |
| atp-binding cassette domain-containing protein | CI641_000210 | Not Available | Negative | 38410 - 39336 | 34588.1 |
| abc transporter atp-binding protein | CI641_000215 | Not Available | Negative | 39329 - 40315 | 36013.9 |
| d,d-dipeptide abc transporter permease | CI641_000220 | Not Available | Negative | 40312 - 41208 | 31915.8 |
| abc transporter permease | CI641_000225 | Not Available | Negative | 41205 - 42227 | 37393.4 |
| abc transporter substrate-binding protein | CI641_000230 | Not Available | Negative | 42229 - 43779 | 57619.1 |
| d-alanyl-d-alanine dipeptidase | CI641_000235 | Not Available | Negative | 43793 - 44374 | 21214.2 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | CI641_000240 | Not Available | Negative | 44632 - 47298 | 100530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





