Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism transcriptional regulator phnf | CI641_014035 | Not Available | Negative | 2929541 - 2930266 | 27637.1 |
| phosphonate abc transporter, permease protein phne | CI641_014040 | Not Available | Negative | 2930287 - 2931066 | 28385.3 |
| phosphonate abc transporter substrate-binding protein | CI641_014045 | Not Available | Negative | 2931127 - 2932143 | 37372.6 |
| phosphonate abc transporter atp-binding protein | CI641_014050 | Not Available | Negative | 2932168 - 2932956 | 29395.3 |
| voc family metalloprotein yjdn | CI641_014055 | Not Available | Negative | 2933089 - 2933532 | 16156.2 |
| phna family protein | CI641_014060 | Not Available | Negative | 2933690 - 2934025 | 12345.7 |
| clamp-binding protein crfc | CI641_014065 | Not Available | Positive | 2934427 - 2936655 | 84100.5 |
| hypothetical protein | CI641_014070 | Not Available | Positive | 2936652 - 2937530 | 32873.6 |
| glycine betaine/l-proline transporter prop | CI641_014075 | Not Available | Positive | 2937794 - 2939296 | 54836.1 |
| lpxt activity modulator pmrr | CI641_014080 | Not Available | Positive | 2939408 - 2939497 | 3449.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





