Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nark family nitrate/nitrite mfs transporter | CI641_000145 | Not Available | Negative | 24324 - 25712 | 49884.1 |
| leucine-rich repeat domain-containing protein | CI641_000150 | Not Available | Negative | 26036 - 27367 | 50619.9 |
| lipoprotein | CI641_000155 | Not Available | Negative | 27391 - 27681 | 10736.6 |
| aromatic amino acid efflux dmt transporter yddg | CI641_000160 | Not Available | Negative | 27940 - 28821 | 31546.3 |
| formate dehydrogenase-n subunit alpha | CI641_000165 | Not Available | Positive | 29053 - 32100 | 112780.0 |
| formate dehydrogenase subunit beta | CI641_000170 | Not Available | Positive | 32113 - 32997 | 32240.4 |
| formate dehydrogenase-n subunit gamma | CI641_000175 | Not Available | Positive | 32990 - 33643 | 25370.0 |
| higa family addiction module antidote protein | CI641_000180 | Not Available | Negative | 33694 - 33978 | 10401.7 |
| alcohol dehydrogenase adhp | CI641_000185 | Not Available | Negative | 34125 - 35135 | 35333.5 |
| nad-dependent malic enzyme | CI641_000190 | Not Available | Negative | 35269 - 36966 | 63136.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





