Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | CI641_013835 | Not Available | Positive | 2885699 - 2886055 | 13520.2 |
| excinuclease abc subunit uvra | CI641_013840 | Not Available | Negative | 2886090 - 2888912 | 103874.0 |
| single-stranded dna-binding protein ssb1 | CI641_013845 | Not Available | Positive | 2889166 - 2889702 | 18976.1 |
| hypothetical protein | CI641_013850 | Not Available | Negative | 2889801 - 2890082 | 10330.0 |
| c-di-gmp phosphodiesterase pdec | CI641_013855 | Not Available | Positive | 2890512 - 2892098 | 60818.8 |
| superoxide response transcriptional regulator soxs | CI641_013860 | Not Available | Negative | 2892101 - 2892424 | 12911.6 |
| redox-sensitive transcriptional activator soxr | CI641_013865 | Not Available | Positive | 2892510 - 2892974 | 17150.7 |
| ncs2 family permease | CI641_013870 | Not Available | Positive | 2893520 - 2894869 | 45714.4 |
| na+/h+ antiporter | CI641_013875 | Not Available | Positive | 2895020 - 2896669 | 60527.5 |
| pentapeptide repeat-containing protein | CI641_013880 | Not Available | Negative | 2896823 - 2898115 | 49124.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





