Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent response regulator transcription factor zrar | CI641_013405 | Not Available | Positive | 2795217 - 2796542 | 48418.4 |
| phosphoribosylamine--glycine ligase | CI641_013410 | Not Available | Negative | 2796539 - 2797828 | 45957.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | CI641_013415 | Not Available | Negative | 2797840 - 2799429 | 57390.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2800046 - 2801599 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2801673 - 2801748 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2801924 - 2804857 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2804935 - 2805050 | Not Available |
| acetyltransferase | CI641_013440 | Not Available | Negative | 2805165 - 2805608 | 16493.7 |
| homoserine o-succinyltransferase | CI641_013445 | Not Available | Positive | 2805765 - 2806694 | 35701.2 |
| malate synthase a | CI641_013450 | Not Available | Positive | 2806963 - 2808564 | 60321.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





