Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1-like element isec1 family transposase | CI641_000080 | Not Available | Positive | 12046 - 13182 | 43103.9 |
| hypothetical protein | CI641_000090 | Not Available | Positive | 13583 - 13939 | 13522.2 |
| tautomerase ppta | CI641_000105 | Not Available | Positive | 14704 - 14937 | 8673.41 |
| flavin reductase family protein | CI641_000110 | Not Available | Negative | 14934 - 15503 | 20941.2 |
| n-hydroxyarylamine o-acetyltransferase | CI641_000115 | Not Available | Positive | 15676 - 16521 | 32335.5 |
| phzf family isomerase | CI641_000120 | Not Available | Negative | 16617 - 17510 | 32267.6 |
| respiratory nitrate reductase subunit gamma | CI641_000125 | Not Available | Negative | 17589 - 18269 | 26019.5 |
| nitrate reductase molybdenum cofactor assembly chaperone | CI641_000130 | Not Available | Negative | 18266 - 18961 | 26162.0 |
| nitrate reductase subunit beta | CI641_000135 | Not Available | Negative | 18961 - 20505 | 58548.1 |
| nitrate reductase subunit alpha | CI641_000140 | Not Available | Negative | 20502 - 24242 | 140204.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





