Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | CI641_013355 | Not Available | Negative | 2785975 - 2787870 | 70873.5 |
| sigma d regulator | CI641_013360 | Not Available | Negative | 2788103 - 2788579 | 18243.9 |
| nad(+) diphosphatase | CI641_013365 | Not Available | Positive | 2788674 - 2789447 | 29690.6 |
| uroporphyrinogen decarboxylase | CI641_013370 | Not Available | Positive | 2789487 - 2790551 | 39212.3 |
| deoxyribonuclease v | CI641_013375 | Not Available | Positive | 2790708 - 2791379 | 24692.0 |
| duf416 family protein | CI641_013380 | Not Available | Positive | 2791422 - 2792012 | 22613.9 |
| dna-binding protein hu-alpha | CI641_013385 | Not Available | Positive | 2792199 - 2792471 | 9535.51 |
| duf1481 domain-containing protein | CI641_013390 | Not Available | Positive | 2792484 - 2793179 | 26352.9 |
| zinc resistance sensor/chaperone zrap | CI641_013395 | Not Available | Negative | 2793181 - 2793606 | 15230.3 |
| two-component system sensor histidine kinase zras | CI641_013400 | Not Available | Positive | 2793844 - 2795220 | 50504.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





