Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor fabr | CI641_013200 | Not Available | Positive | 2753894 - 2754544 | 24536.5 |
| yijd family membrane protein | CI641_013205 | Not Available | Positive | 2754544 - 2754903 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | CI641_013210 | Not Available | Negative | 2754943 - 2756043 | 41985.3 |
| tonb-dependent vitamin b12 receptor btub | CI641_013215 | Not Available | Positive | 2756412 - 2758256 | 68393.7 |
| glutamate racemase | CI641_013220 | Not Available | Positive | 2758201 - 2759058 | 31133.8 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2759432 - 2760985 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2761059 - 2761134 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2761319 - 2764252 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2764330 - 2764445 | Not Available |
| udp-n-acetylmuramate dehydrogenase | CI641_013250 | Not Available | Positive | 2764748 - 2765776 | 37794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





