Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerc | CI641_000005 | Not Available | Positive | 1 - 1069 | 40792.0 |
| isas1-like element isec1 family transposase | CI641_000020 | Not Available | Positive | 2292 - 3428 | 43130.9 |
| hypothetical protein | CI641_000030 | Not Available | Positive | 3572 - 4267 | 26006.6 |
| hypothetical protein | CI641_000035 | Not Available | Positive | 4269 - 4700 | 17139.4 |
| type i toxin-antitoxin system syme family toxin | CI641_000040 | Not Available | Negative | 4747 - 5040 | 10887.2 |
| helix-turn-helix transcriptional regulator | CI641_000045 | Not Available | Negative | 5122 - 5514 | 14386.6 |
| toprim domain-containing protein | CI641_000050 | Not Available | Positive | 5629 - 8451 | 102101.0 |
| site-specific tyrosine recombinase xerc | CI641_000055 | Not Available | Positive | 8807 - 9916 | 42280.8 |
| hypothetical protein | CI641_000070 | Not Available | Positive | 11043 - 11309 | 9535.95 |
| hypothetical protein | CI641_000075 | Not Available | Positive | 11311 - 11706 | 15499.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





