Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase fdhd | CI641_012845 | Not Available | Positive | 2672740 - 2673573 | 30533.8 |
| duf3829 domain-containing protein | CI641_012850 | Not Available | Positive | 2673726 - 2674766 | 38641.5 |
| hth domain-containing protein | CI641_012855 | Not Available | Negative | 2674816 - 2676564 | 66095.7 |
| pts fructose-like transporter subunit iibc | CI641_012865 | Not Available | Negative | 2677624 - 2679075 | 51123.5 |
| pts fructose transporter subunit iia | CI641_012870 | Not Available | Negative | 2679086 - 2679532 | 16186.6 |
| l-rhamnose mutarotase | CI641_012875 | Not Available | Negative | 2679845 - 2680159 | 12235.4 |
| rhamnulose-1-phosphate aldolase | CI641_012880 | Not Available | Negative | 2680169 - 2680993 | 30123.1 |
| l-rhamnose isomerase | CI641_012885 | Not Available | Negative | 2681444 - 2682703 | 47097.8 |
| rhamnulokinase | CI641_012890 | Not Available | Negative | 2682700 - 2684169 | 54126.2 |
| hth-type transcriptional activator rhas | CI641_012895 | Not Available | Positive | 2684457 - 2685293 | 32331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





