Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase subunit tatc | CI641_012545 | Not Available | Positive | 2607657 - 2608433 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | CI641_012550 | Not Available | Positive | 2608475 - 2609257 | 29061.7 |
| transcription/translation regulatory transformer protein rfah | CI641_012555 | Not Available | Negative | 2609254 - 2609742 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | CI641_012560 | Not Available | Positive | 2609909 - 2611402 | 55606.8 |
| nad(p)h-flavin reductase | CI641_012565 | Not Available | Positive | 2611448 - 2612149 | 26243.5 |
| acetyl-coa c-acyltransferase fada | CI641_012570 | Not Available | Negative | 2612341 - 2613504 | 40812.6 |
| fatty acid oxidation complex subunit alpha fadb | CI641_012575 | Not Available | Negative | 2613514 - 2615703 | 79541.4 |
| xaa-pro dipeptidase | CI641_012580 | Not Available | Positive | 2615893 - 2617224 | 50178.9 |
| impact family protein | CI641_012585 | Not Available | Positive | 2617224 - 2617838 | 21758.1 |
| trk system potassium transporter trkh | CI641_012590 | Not Available | Positive | 2617877 - 2619328 | 52976.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





