Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_012395 | Not Available | Positive | 2578951 - 2579247 | 10692.9 |
| hypothetical protein | CI641_012400 | Not Available | Positive | 2579434 - 2579637 | 7177.59 |
| diaminopimelate epimerase | CI641_012405 | Not Available | Positive | 2579674 - 2580498 | 30210.4 |
| duf484 domain-containing protein | CI641_012410 | Not Available | Positive | 2580495 - 2581202 | 26730.4 |
| tyrosine recombinase xerc | CI641_012415 | Not Available | Positive | 2581199 - 2582095 | 33869.7 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | CI641_012420 | Not Available | Positive | 2582095 - 2582811 | 27123.4 |
| dna helicase ii | CI641_012425 | Not Available | Positive | 2582895 - 2585057 | 82008.7 |
| acetolactate synthase | CI641_012430 | Not Available | Negative | 2585102 - 2586004 | 32653.9 |
| magnesium/cobalt transporter cora | CI641_012435 | Not Available | Positive | 2586468 - 2587418 | 36591.8 |
| duf2628 domain-containing protein | CI641_012440 | Not Available | Negative | 2587461 - 2587841 | 14550.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





