Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase rep | CI641_012240 | Not Available | Positive | 2546694 - 2548715 | 77114.7 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | CI641_012245 | Not Available | Negative | 2548762 - 2550246 | 54874.4 |
| atp-dependent rna helicase rhlb | CI641_012250 | Not Available | Negative | 2550380 - 2551645 | 47128.7 |
| thioredoxin trxa | CI641_012255 | Not Available | Positive | 2551776 - 2552105 | 11807.2 |
| rho operon leader peptide rhol | CI641_012260 | Not Available | Positive | 2552246 - 2552347 | 3750.4 |
| transcription termination factor rho | CI641_012265 | Not Available | Positive | 2552432 - 2553691 | 47007.1 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | CI641_012270 | Not Available | Positive | 2553931 - 2555034 | 40959.7 |
| eca polysaccharide chain length modulation protein | CI641_012275 | Not Available | Positive | 2555046 - 2556092 | 39491.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | CI641_012280 | Not Available | Positive | 2556148 - 2557278 | 42219.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | CI641_012285 | Not Available | Positive | 2557275 - 2558537 | 45871.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





