Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase rava | CI641_012090 | Not Available | Negative | 2515655 - 2517151 | 56419.1 |
| low affinity potassium transporter kup | CI641_012095 | Not Available | Positive | 2517374 - 2519242 | 69298.3 |
| d-ribose pyranase | CI641_012100 | Not Available | Positive | 2519409 - 2519828 | 15316.5 |
| ribose abc transporter atp-binding protein rbsa | CI641_012105 | Not Available | Positive | 2519836 - 2521341 | 54988.0 |
| ribose abc transporter permease | CI641_012110 | Not Available | Positive | 2521346 - 2522311 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | CI641_012115 | Not Available | Positive | 2522336 - 2523226 | 30940.2 |
| ribokinase | CI641_012120 | Not Available | Positive | 2523352 - 2524281 | 32292.4 |
| ribose operon transcriptional repressor rbsr | CI641_012125 | Not Available | Positive | 2524285 - 2525277 | 36614.1 |
| dha2 family efflux mfs transporter permease subunit | CI641_012130 | Not Available | Negative | 2525243 - 2526670 | 51431.8 |
| fadr family transcriptional regulator | CI641_012135 | Not Available | Negative | 2526693 - 2527385 | 26063.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





