Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | CI641_011790 | Not Available | Negative | 2453921 - 2454538 | 21418.8 |
| 2-dehydro-3-deoxygalactonokinase | CI641_011795 | Not Available | Negative | 2454522 - 2455400 | 31384.3 |
| fadr family transcriptional regulator | CI641_011800 | Not Available | Negative | 2455397 - 2456086 | 26081.1 |
| hypothetical protein | CI641_011805 | Not Available | Positive | 2456364 - 2457020 | 24170.9 |
| sugar-phosphatase | CI641_011810 | Not Available | Negative | 2457066 - 2457878 | 29722.8 |
| duf937 domain-containing protein | CI641_011815 | Not Available | Negative | 2457993 - 2458400 | 14145.0 |
| dna gyrase subunit b | CI641_011820 | Not Available | Negative | 2458631 - 2461045 | 89955.0 |
| dna replication/repair protein recf | CI641_011825 | Not Available | Negative | 2461074 - 2462147 | 40516.4 |
| dna polymerase iii subunit beta | CI641_011830 | Not Available | Negative | 2462147 - 2463247 | 40589.1 |
| chromosomal replication initiator protein dnaa | CI641_011835 | Not Available | Negative | 2463252 - 2464655 | 52553.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





