Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc family protein | CI641_011535 | Not Available | Positive | 2397464 - 2398327 | 33176.9 |
| dna damage-inducible protein d | CI641_011540 | Not Available | Positive | 2398548 - 2399372 | 31259.9 |
| trimeric intracellular cation channel family protein | CI641_011545 | Not Available | Positive | 2399663 - 2400280 | 22049.8 |
| nad-dependent dna ligase ligb | CI641_011550 | Not Available | Negative | 2400277 - 2401959 | 63212.8 |
| guanylate kinase | CI641_011555 | Not Available | Positive | 2402217 - 2402840 | 23594.1 |
| dna-directed rna polymerase subunit omega | CI641_011560 | Not Available | Positive | 2402895 - 2403170 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | CI641_011565 | Not Available | Positive | 2403189 - 2405297 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | CI641_011570 | Not Available | Positive | 2405304 - 2405993 | 25344.6 |
| atp-dependent dna helicase recg | CI641_011575 | Not Available | Positive | 2405999 - 2408080 | 76480.2 |
| sodium/glutamate symporter | CI641_011580 | Not Available | Negative | 2408246 - 2409451 | 42445.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





