Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CI641_011235 | Not Available | Negative | 2332774 - 2333589 | 31452.0 |
| mfs transporter | CI641_011240 | Not Available | Positive | 2333815 - 2335215 | 51395.8 |
| glycoside hydrolase family 127 protein | CI641_011245 | Not Available | Positive | 2335226 - 2337196 | 75111.0 |
| mipa/ompv family protein | CI641_011250 | Not Available | Negative | 2337326 - 2338066 | 27370.9 |
| lysr family transcriptional regulator | CI641_011255 | Not Available | Positive | 2338190 - 2339164 | 37245.4 |
| hlyd family secretion protein | CI641_011260 | Not Available | Negative | 2339161 - 2340297 | 41799.6 |
| duf3302 domain-containing protein | CI641_011265 | Not Available | Negative | 2340303 - 2340626 | 12409.3 |
| aldehyde dehydrogenase | CI641_011270 | Not Available | Negative | 2341171 - 2342709 | 56339.5 |
| l-threonine dehydrogenase | CI641_011275 | Not Available | Negative | 2342874 - 2344025 | 40342.6 |
| selenocysteine-specific translation elongation factor | CI641_011280 | Not Available | Negative | 2344215 - 2346059 | 68828.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





