Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ldr family protein | CI641_010960 | Not Available | Negative | 2280377 - 2280484 | 3882.93 |
| type i toxin-antitoxin system toxic polypeptide ldrd | CI641_010970 | Not Available | Negative | 2280860 - 2280967 | 3916.94 |
| transporter | CI641_010980 | Not Available | Positive | 2281443 - 2282714 | 47269.3 |
| dipeptide abc transporter atp binding subunit dppf | CI641_010985 | Not Available | Negative | 2282744 - 2283748 | 37540.6 |
| dipeptide abc transporter atp-binding protein | CI641_010990 | Not Available | Negative | 2283745 - 2284728 | 35846.5 |
| dipeptide abc transporter permease dppc | CI641_010995 | Not Available | Negative | 2284739 - 2285641 | 32310.5 |
| dipeptide abc transporter permease dppb | CI641_011000 | Not Available | Negative | 2285651 - 2286670 | 37499.4 |
| hypothetical protein | CI641_011005 | Not Available | Positive | 2286633 - 2286848 | 7789.34 |
| dipeptide abc transporter substrate-binding protein dppa | CI641_011010 | Not Available | Negative | 2286821 - 2288428 | 60296.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2289173 - 2289306 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





