Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | CI641_010855 | Not Available | Negative | 2251155 - 2251757 | 22635.6 |
| lysr family transcriptional regulator | CI641_010860 | Not Available | Positive | 2252277 - 2253176 | 33275.5 |
| inner membrane protein yhjd | CI641_010865 | Not Available | Positive | 2253225 - 2254238 | 37902.6 |
| mhs family mfs transporter | CI641_010870 | Not Available | Positive | 2254649 - 2255971 | 47210.9 |
| asma family protein | CI641_010875 | Not Available | Negative | 2256205 - 2258265 | 74461.8 |
| cyclic-guanylate-specific phosphodiesterase | CI641_010880 | Not Available | Negative | 2258335 - 2259102 | 29602.9 |
| 2-dehydro-3-deoxygluconokinase | CI641_010885 | Not Available | Positive | 2259334 - 2260263 | 33963.2 |
| insulinase family protein | CI641_010890 | Not Available | Negative | 2260359 - 2261855 | 55445.4 |
| dicarboxylate/amino acid:cation symporter | CI641_010895 | Not Available | Negative | 2262076 - 2263362 | 45439.2 |
| biofilm formation regulator hmsp | CI641_010900 | Not Available | Negative | 2263545 - 2265533 | 74457.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





