Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase autocleavage activator panm | CI641_010540 | Not Available | Positive | 2183833 - 2184216 | 14559.4 |
| branched-chain amino acid abc transporter substrate-binding protein | CI641_010545 | Not Available | Negative | 2184415 - 2185518 | 39078.5 |
| rna polymerase sigma factor rpoh | CI641_010550 | Not Available | Negative | 2185789 - 2186643 | 32470.6 |
| cell division protein ftsx | CI641_010555 | Not Available | Negative | 2186888 - 2187946 | 38545.9 |
| cell division atp-binding protein ftse | CI641_010560 | Not Available | Negative | 2187939 - 2188607 | 24440.8 |
| signal recognition particle-docking protein ftsy | CI641_010565 | Not Available | Negative | 2188610 - 2190103 | 54533.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase | CI641_010570 | Not Available | Positive | 2190253 - 2190849 | 21678.8 |
| duf1145 family protein | CI641_010575 | Not Available | Positive | 2190839 - 2191108 | 10280.4 |
| duf2500 domain-containing protein | CI641_010580 | Not Available | Negative | 2191111 - 2191470 | 13529.4 |
| lysoplasmalogenase | CI641_010585 | Not Available | Positive | 2191611 - 2192237 | 23791.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





