Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspj | CI641_009935 | Not Available | Positive | 2053042 - 2053629 | 22246.6 |
| general secretion pathway protein gspk | CI641_009940 | Not Available | Positive | 2053622 - 2054605 | 37648.7 |
| type ii secretion system protein gspl | CI641_009945 | Not Available | Positive | 2054620 - 2055783 | 44542.3 |
| type ii secretion system protein m | CI641_009950 | Not Available | Positive | 2055780 - 2056241 | 17234.8 |
| prepilin peptidase | CI641_009955 | Not Available | Positive | 2056241 - 2056918 | 24900.2 |
| bacterioferritin | CI641_009960 | Not Available | Negative | 2056947 - 2057423 | 18496.2 |
| bacterioferritin-associated ferredoxin | CI641_009965 | Not Available | Negative | 2057495 - 2057689 | 7363.04 |
| bifunctional chitinase/lysozyme | CI641_009970 | Not Available | Negative | 2057858 - 2060551 | 97004.2 |
| elongation factor tu | CI641_009975 | Not Available | Negative | 2060843 - 2062027 | 43286.1 |
| elongation factor g | CI641_009980 | Not Available | Negative | 2062098 - 2064212 | 77585.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





