Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s10 | CI641_009885 | Not Available | Negative | 2043657 - 2043968 | 11736.3 |
| putative general secretion pathway protein gspb | CI641_009890 | Not Available | Negative | 2044206 - 2044625 | 15862.8 |
| type ii secretion system protein gspa | CI641_009895 | Not Available | Negative | 2044627 - 2046096 | 55273.0 |
| type ii secretion system protein gspc | CI641_009900 | Not Available | Positive | 2046276 - 2047091 | 30039.9 |
| type ii secretion system protein gspd | CI641_009905 | Not Available | Positive | 2047075 - 2049027 | 70804.4 |
| type ii secretion system protein gspe | CI641_009910 | Not Available | Positive | 2049037 - 2050518 | 54555.9 |
| type ii secretion system protein gspf | CI641_009915 | Not Available | Positive | 2050515 - 2051711 | 44341.9 |
| type ii secretion system protein gspg | CI641_009920 | Not Available | Positive | 2051721 - 2052158 | 15906.1 |
| type ii secretion system protein gsph | CI641_009925 | Not Available | Positive | 2052166 - 2052675 | 18593.1 |
| type ii secretion system protein gspi | CI641_009930 | Not Available | Positive | 2052672 - 2053049 | 13902.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





