Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Upfb | CI641_024370 | Not Available | Positive | 4989508 - 4990296 | 27078.7 |
| Conserved protein of unknown function ppfa | CI641_024375 | Not Available | Positive | 4990336 - 4990758 | 15745.8 |
| Upfa | CI641_024380 | Not Available | Positive | 4990936 - 4991325 | 14691.2 |
| Non-functional integrase | CI641_024545 | Not Available | Positive | 5020386 - 5021162 | 28724.1 |
| hypothetical protein | CI641_024550 | Not Available | Negative | 5021220 - 5021477 | 9910.76 |
| Attl | Not Available | Not Available | Positive | 5021956 - 5021970 | Not Available |
| Gp37 | CI641_024555 | Not Available | Positive | 5022240 - 5023106 | 33189.0 |
| Partition protein para | CI641_024560 | Not Available | Positive | 5023679 - 5024884 | 44401.3 |
| Partition protein parb | CI641_024565 | Not Available | Positive | 5024881 - 5025858 | 36700.0 |
| Dna polymerase | CI641_024570 | Not Available | Negative | 5025940 - 5027211 | 47927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





