Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | CI641_009685 | Not Available | Negative | 2020718 - 2021536 | 29411.3 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | CI641_009690 | Not Available | Negative | 2021541 - 2022113 | 20641.7 |
| hypothetical protein | CI641_009695 | Not Available | Negative | 2022118 - 2022660 | 19904.0 |
| duf494 domain-containing protein | CI641_009700 | Not Available | Negative | 2022689 - 2023162 | 18497.2 |
| dna-protecting protein dpra | CI641_009705 | Not Available | Negative | 2023134 - 2024258 | 40958.2 |
| peptide deformylase | CI641_009710 | Not Available | Positive | 2024388 - 2024897 | 19329.6 |
| methionyl-trna formyltransferase | CI641_009715 | Not Available | Positive | 2024912 - 2025859 | 34170.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CI641_009720 | Not Available | Positive | 2025905 - 2027194 | 48322.2 |
| trk system potassium transporter trka | CI641_009725 | Not Available | Positive | 2027216 - 2028592 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | CI641_009730 | Not Available | Positive | 2028722 - 2029132 | 14957.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





