Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator fis | CI641_009580 | Not Available | Positive | 2001957 - 2002253 | 11240.6 |
| adenine-specific dna-methyltransferase | CI641_009585 | Not Available | Positive | 2002339 - 2003223 | 33444.4 |
| duf2556 domain-containing protein | CI641_009590 | Not Available | Positive | 2003307 - 2003486 | 7203.93 |
| multidrug efflux transporter transcriptional repressor acrs | CI641_009595 | Not Available | Negative | 2003489 - 2004151 | 25199.7 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acre | CI641_009600 | Not Available | Positive | 2004550 - 2005707 | 41320.0 |
| multidrug efflux rnd transporter permease subunit acrf | CI641_009605 | Not Available | Positive | 2005719 - 2008823 | 111471.0 |
| hypothetical protein | CI641_009610 | Not Available | Positive | 2009076 - 2009297 | 7452.14 |
| amino acid abc transporter substrate-binding protein | CI641_009615 | Not Available | Positive | 2009728 - 2010753 | 37034.8 |
| amino acid abc transporter permease | CI641_009620 | Not Available | Positive | 2010821 - 2012002 | 43263.9 |
| amino acid abc transporter permease | CI641_009625 | Not Available | Positive | 2012012 - 2013115 | 41485.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





