Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium/sodium antiporter | CI641_009280 | Not Available | Positive | 1937543 - 1938520 | 34742.9 |
| arabinose-5-phosphate isomerase kdsd | CI641_009285 | Not Available | Positive | 1938534 - 1939520 | 35198.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | CI641_009290 | Not Available | Positive | 1939541 - 1940107 | 20016.3 |
| lps export abc transporter periplasmic protein lptc | CI641_009295 | Not Available | Positive | 1940104 - 1940679 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | CI641_009300 | Not Available | Positive | 1940648 - 1941205 | 20128.1 |
| lps export abc transporter atp-binding protein | CI641_009305 | Not Available | Positive | 1941212 - 1941937 | 26802.3 |
| rna polymerase factor sigma-54 | CI641_009310 | Not Available | Positive | 1941985 - 1943418 | 53996.8 |
| ribosome hibernation promoting factor | CI641_009315 | Not Available | Positive | 1943441 - 1943728 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | CI641_009320 | Not Available | Positive | 1943846 - 1944337 | 17960.6 |
| rnase adapter rapz | CI641_009325 | Not Available | Positive | 1944383 - 1945237 | 32494.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





