Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tdca | CI641_008880 | Not Available | Negative | 1862212 - 1863150 | 34540.9 |
| dna-binding transcriptional activator tdcr | CI641_008885 | Not Available | Positive | 1863339 - 1863683 | 13552.3 |
| hypothetical protein | CI641_008890 | Not Available | Positive | 1863939 - 1864478 | 20602.6 |
| yhac family protein | CI641_008895 | Not Available | Positive | 1864500 - 1865687 | 45175.2 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1866082 - 1866458 | Not Available |
| glycerate 2-kinase | CI641_008905 | Not Available | Negative | 1866491 - 1867636 | 39136.7 |
| 2-hydroxy-3-oxopropionate reductase | CI641_008910 | Not Available | Negative | 1867733 - 1868623 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | CI641_008915 | Not Available | Negative | 1868653 - 1869423 | 27400.6 |
| mfs transporter | CI641_008920 | Not Available | Negative | 1869439 - 1870773 | 49012.0 |
| galactarate dehydratase | CI641_008925 | Not Available | Positive | 1871148 - 1872719 | 56330.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





