Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | CI641_008830 | Not Available | Positive | 1850404 - 1851105 | 25964.0 |
| hypothetical protein | CI641_008835 | Not Available | Positive | 1851128 - 1851292 | 5961.16 |
| serine dehydratase subunit alpha family protein | CI641_008840 | Not Available | Negative | 1851426 - 1852736 | 45362.8 |
| haaap family serine/threonine permease | CI641_008845 | Not Available | Negative | 1852764 - 1854095 | 48317.6 |
| l-serine ammonia-lyase | CI641_008850 | Not Available | Negative | 1854370 - 1855734 | 48466.5 |
| enamine/imine deaminase | CI641_008855 | Not Available | Negative | 1855806 - 1856195 | 14008.0 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | CI641_008860 | Not Available | Negative | 1856209 - 1858503 | 85940.4 |
| propionate kinase | CI641_008865 | Not Available | Negative | 1858537 - 1859745 | 43372.7 |
| threonine/serine transporter tdcc | CI641_008870 | Not Available | Negative | 1859771 - 1861102 | 48881.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | CI641_008875 | Not Available | Negative | 1861124 - 1862113 | 35234.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





