Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygjv family protein | CI641_008730 | Not Available | Negative | 1831918 - 1832469 | 20576.8 |
| altronate dehydratase | CI641_008735 | Not Available | Negative | 1832552 - 1834039 | 54126.2 |
| glucuronate isomerase | CI641_008740 | Not Available | Negative | 1834054 - 1835466 | 53986.1 |
| mfs transporter | CI641_008745 | Not Available | Positive | 1835949 - 1837247 | 46909.1 |
| pilus assembly protein cbld | CI641_008750 | Not Available | Negative | 1837335 - 1838423 | 40457.0 |
| fimbrial protein | CI641_008755 | Not Available | Negative | 1838420 - 1841104 | 98466.8 |
| fimbrial protein | CI641_008760 | Not Available | Negative | 1841196 - 1841696 | 17741.6 |
| fimbrial protein | CI641_008765 | Not Available | Negative | 1841726 - 1842349 | 23115.7 |
| transcriptional regulator exur | CI641_008770 | Not Available | Positive | 1842738 - 1843514 | 29837.3 |
| deda family protein | CI641_008775 | Not Available | Positive | 1843859 - 1844521 | 24587.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





