Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | CI641_008670 | Not Available | Positive | 1817393 - 1818826 | 52161.7 |
| protein ygjj | CI641_008675 | Not Available | Positive | 1818960 - 1820030 | 40100.5 |
| alpha-glucosidase | CI641_008680 | Not Available | Positive | 1820047 - 1822398 | 88308.6 |
| nadph-dependent 2,4-dienoyl-coa reductase | CI641_008685 | Not Available | Positive | 1822724 - 1824742 | 72772.7 |
| type ii toxin-antitoxin system antitoxin higa | CI641_008690 | Not Available | Negative | 1824787 - 1825203 | 14997.3 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | CI641_008700 | Not Available | Negative | 1825474 - 1826610 | 42350.9 |
| m48 family metallopeptidase | CI641_008705 | Not Available | Positive | 1826695 - 1827198 | 19483.6 |
| gfo/idh/moca family oxidoreductase | CI641_008715 | Not Available | Positive | 1828036 - 1829022 | 36248.3 |
| terc family membrane protein alx | CI641_008720 | Not Available | Positive | 1829305 - 1830270 | 35911.1 |
| serine/threonine transporter sstt | CI641_008725 | Not Available | Positive | 1830669 - 1831913 | 43480.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





