Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation nickel metallochaperone hypa | CI641_008270 | Not Available | Negative | 1734730 - 1735071 | 12697.2 |
| hydrogenase-2 assembly chaperone | CI641_008275 | Not Available | Negative | 1735064 - 1735552 | 17964.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | CI641_008280 | Not Available | Negative | 1735545 - 1736039 | 17719.8 |
| hydrogenase 2 large subunit | CI641_008285 | Not Available | Negative | 1736039 - 1737742 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | CI641_008290 | Not Available | Negative | 1737739 - 1738917 | 43607.7 |
| hydrogenase 2 operon protein hyba | CI641_008295 | Not Available | Negative | 1738907 - 1739893 | 36005.0 |
| hydrogenase 2 small subunit | CI641_008300 | Not Available | Negative | 1739896 - 1741014 | 39654.3 |
| duf2623 domain-containing protein | CI641_008305 | Not Available | Negative | 1741203 - 1741490 | 10946.1 |
| dienelactone hydrolase family protein | CI641_008310 | Not Available | Negative | 1741609 - 1742496 | 32554.6 |
| l-glyceraldehyde 3-phosphate reductase | CI641_008315 | Not Available | Positive | 1742653 - 1743693 | 38856.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





