Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspe | CI641_008120 | Not Available | Negative | 1696118 - 1697611 | 55237.9 |
| type ii secretion system protein gspd | CI641_008125 | Not Available | Negative | 1697611 - 1699671 | 74192.1 |
| type ii secretion system protein gspc | CI641_008130 | Not Available | Negative | 1699701 - 1700660 | 35759.2 |
| hypothetical protein | CI641_008135 | Not Available | Negative | 1700678 - 1701088 | 14670.8 |
| prepilin peptidase | CI641_008140 | Not Available | Negative | 1701154 - 1701963 | 29497.9 |
| duf4092 domain-containing protein | CI641_008145 | Not Available | Negative | 1702111 - 1706673 | 168314.0 |
| glycolate permease glca | CI641_008150 | Not Available | Negative | 1707159 - 1708841 | 58927.7 |
| malate synthase g | CI641_008155 | Not Available | Negative | 1709197 - 1711368 | 80523.2 |
| protein glcg | CI641_008160 | Not Available | Negative | 1711390 - 1711794 | 13737.5 |
| glycolate oxidase subunit glcf | CI641_008165 | Not Available | Negative | 1711799 - 1713022 | 45120.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





