Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf554 domain-containing protein | CI641_008070 | Not Available | Positive | 1689162 - 1689869 | 24615.5 |
| Trna-phe | Not Available | Not Available | Positive | 1689975 - 1690050 | Not Available |
| type ii secretion system protein | CI641_008080 | Not Available | Negative | 1690199 - 1690735 | 20302.5 |
| type ii secretion system protein gspl | CI641_008085 | Not Available | Negative | 1690737 - 1691915 | 44161.3 |
| general secretion pathway protein gspk | CI641_008090 | Not Available | Negative | 1691912 - 1692889 | 36544.3 |
| type ii secretion system protein gspj | CI641_008095 | Not Available | Negative | 1692892 - 1693491 | 22193.2 |
| type ii secretion system protein gspi | CI641_008100 | Not Available | Negative | 1693488 - 1693859 | 13573.3 |
| type ii secretion system protein gsph | CI641_008105 | Not Available | Negative | 1693856 - 1694419 | 21155.7 |
| type ii secretion system protein gspg | CI641_008110 | Not Available | Negative | 1694423 - 1694878 | 16663.8 |
| type ii secretion system protein gspf | CI641_008115 | Not Available | Negative | 1694895 - 1696118 | 44972.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





