Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1202 family protein | CI641_008020 | Not Available | Negative | 1678167 - 1679174 | 38475.4 |
| l-asparaginase 2 | CI641_008025 | Not Available | Negative | 1679291 - 1680337 | 36837.7 |
| duf2884 family protein | CI641_008030 | Not Available | Negative | 1680513 - 1681232 | 26430.8 |
| duf469 domain-containing protein | CI641_008035 | Not Available | Negative | 1681416 - 1681742 | 12881.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | CI641_008040 | Not Available | Negative | 1681742 - 1682461 | 27308.9 |
| a/g-specific adenine glycosylase | CI641_008045 | Not Available | Positive | 1682622 - 1683674 | 39176.2 |
| oxidative damage protection protein | CI641_008050 | Not Available | Positive | 1683702 - 1683977 | 10953.2 |
| membrane-bound lytic murein transglycosylase mltc | CI641_008055 | Not Available | Positive | 1684042 - 1685121 | 40114.8 |
| nucleoside permease | CI641_008060 | Not Available | Positive | 1685323 - 1686579 | 46392.0 |
| ornithine decarboxylase | CI641_008065 | Not Available | Negative | 1686629 - 1688764 | 79509.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





