Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Antirepressor protein | CI641_024165 | Not Available | Negative | 4956620 - 4957735 | 42174.9 |
| Icd | CI641_024170 | Not Available | Negative | 4957732 - 4958091 | 12911.3 |
| Putative large terminase protein | CI641_024175 | Not Available | Negative | 4958313 - 4959797 | 55548.7 |
| Paca | CI641_024180 | Not Available | Negative | 4959797 - 4960990 | 45251.3 |
| Late promoter-activating protein lpa | CI641_024185 | Not Available | Negative | 4961076 - 4961528 | 18118.8 |
| Conserved protein of unknown function pdcb | CI641_024190 | Not Available | Negative | 4961617 - 4962660 | 39678.8 |
| Pdca | CI641_024195 | Not Available | Negative | 4962688 - 4962867 | 6775.69 |
| Toxin doc | CI641_024200 | Not Available | Negative | 4962872 - 4963252 | 13602.1 |
| Prevention of host death by doc toxicity | CI641_024205 | Not Available | Negative | 4963252 - 4963473 | 8133.53 |
| Putative restriction-modification protein | CI641_024210 | Not Available | Positive | 4963656 - 4965212 | 57787.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





