Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ibsc | CI641_007765 | Not Available | Negative | 1627886 - 1627945 | 2179.02 |
| d-3-phosphoglycerate dehydrogenase | CI641_007770 | Not Available | Negative | 1628174 - 1629406 | 44178.4 |
| ribose-5-phosphate isomerase rpia | CI641_007775 | Not Available | Negative | 1629662 - 1630321 | 22861.8 |
| hypothetical protein | CI641_007780 | Not Available | Negative | 1630377 - 1630562 | 6756.52 |
| lysr family transcriptional regulator argp | CI641_007785 | Not Available | Positive | 1630704 - 1631597 | 33473.6 |
| methylmalonyl-coa mutase | CI641_007790 | Not Available | Positive | 1631801 - 1633945 | 77910.6 |
| methylmalonyl co-a mutase-associated gtpase meab | CI641_007795 | Not Available | Positive | 1633938 - 1634933 | 36630.0 |
| methylmalonyl-coa decarboxylase | CI641_007800 | Not Available | Positive | 1634944 - 1635729 | 29174.3 |
| propionyl-coa:succinate coa transferase | CI641_007805 | Not Available | Positive | 1635753 - 1637231 | 53858.6 |
| lysr family transcriptional regulator | CI641_007810 | Not Available | Negative | 1637228 - 1638124 | 34702.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





