Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hila family transcriptional regulator ygeh | CI641_007395 | Not Available | Positive | 1556054 - 1557430 | 52799.9 |
| hypothetical protein | CI641_007400 | Not Available | Positive | 1557598 - 1557816 | 8055.23 |
| lytic transglycosylase domain-containing protein | CI641_007405 | Not Available | Positive | 1557899 - 1558375 | 18266.5 |
| hypothetical protein | CI641_007415 | Not Available | Negative | 1559273 - 1559509 | 9297.78 |
| type iii secretion apparatus protein orga/mxik | CI641_007430 | Not Available | Negative | 1559921 - 1560502 | 22782.7 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | CI641_007435 | Not Available | Negative | 1560518 - 1561252 | 27592.6 |
| hypothetical protein | CI641_007440 | Not Available | Negative | 1561293 - 1561580 | 10770.6 |
| prgh/eprh family type iii secretion apparatus protein | CI641_007450 | Not Available | Negative | 1561854 - 1563035 | 45219.7 |
| luxr family transcriptional regulator | CI641_007455 | Not Available | Positive | 1563293 - 1563724 | 16315.7 |
| invasion protein | CI641_007460 | Not Available | Positive | 1563795 - 1564088 | 11103.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





