Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease muth | CI641_007280 | Not Available | Positive | 1533622 - 1534311 | 25500.9 |
| terc family protein | CI641_007285 | Not Available | Positive | 1534380 - 1535093 | 26159.0 |
| lipoprotein ygdr | CI641_007290 | Not Available | Positive | 1535231 - 1535449 | 7877.35 |
| nadp(h)-dependent aldo-keto reductase | CI641_007295 | Not Available | Positive | 1535557 - 1536597 | 38501.7 |
| lysophospholipid transporter lplt | CI641_007300 | Not Available | Negative | 1536629 - 1537822 | 41658.1 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | CI641_007305 | Not Available | Negative | 1537815 - 1539974 | 80716.8 |
| hth-type transcriptional regulator galr | CI641_007315 | Not Available | Positive | 1540560 - 1541591 | 37110.2 |
| diaminopimelate decarboxylase | CI641_007320 | Not Available | Negative | 1541598 - 1542860 | 46180.0 |
| lysr family transcriptional regulator | CI641_007325 | Not Available | Positive | 1542982 - 1543917 | 34424.7 |
| aspartate/glutamate racemase | CI641_007330 | Not Available | Negative | 1543904 - 1544596 | 25309.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





