Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CI641_007115 | Not Available | Positive | 1491165 - 1492091 | 36913.9 |
| hypothetical protein | CI641_007120 | Not Available | Positive | 1492346 - 1493560 | 44588.8 |
| type vi secretion protein vask | CI641_007125 | Not Available | Positive | 1493617 - 1496943 | 124088.0 |
| type vi secretion system protein tssa | CI641_007130 | Not Available | Positive | 1496936 - 1498546 | 60196.4 |
| paar domain-containing protein | CI641_007135 | Not Available | Positive | 1498546 - 1499469 | 34212.2 |
| hypothetical protein | CI641_007140 | Not Available | Positive | 1500178 - 1500471 | 11067.1 |
| isas1 family transposase | CI641_007150 | Not Available | Positive | 1500967 - 1502103 | 43130.9 |
| hypothetical protein | CI641_007165 | Not Available | Positive | 1504647 - 1505069 | 15950.0 |
| hypothetical protein | CI641_007170 | Not Available | Positive | 1505149 - 1505553 | 14934.9 |
| type vi secretion system baseplate subunit tssf | CI641_007175 | Not Available | Positive | 1505629 - 1507389 | 67416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





