Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculose-phosphate aldolase | CI641_006965 | Not Available | Negative | 1456387 - 1457034 | 23791.7 |
| l-fucose-proton symporter | CI641_006970 | Not Available | Positive | 1457581 - 1458897 | 47547.6 |
| l-fucose isomerase | CI641_006975 | Not Available | Positive | 1458930 - 1460708 | 65037.3 |
| l-fuculokinase | CI641_006980 | Not Available | Positive | 1460817 - 1462235 | 52219.6 |
| l-fucose mutarotase | CI641_006985 | Not Available | Positive | 1462237 - 1462659 | 15474.0 |
| l-fucose operon activator | CI641_006990 | Not Available | Positive | 1462717 - 1463448 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | CI641_006995 | Not Available | Negative | 1463492 - 1464592 | 41907.5 |
| duf423 domain-containing protein | CI641_007000 | Not Available | Negative | 1464585 - 1464980 | 14334.0 |
| transcriptional regulator gcva | CI641_007005 | Not Available | Negative | 1464999 - 1465916 | 34403.4 |
| ygdi/ygdr family lipoprotein | CI641_007010 | Not Available | Negative | 1466267 - 1466494 | 8174.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





