Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | CI641_006915 | Not Available | Negative | 1445881 - 1446330 | 16257.0 |
| trna pseudouridine(65) synthase truc | CI641_006920 | Not Available | Negative | 1446348 - 1447130 | 29657.4 |
| yqcc family protein | CI641_006925 | Not Available | Negative | 1447130 - 1447459 | 12772.2 |
| secy-interacting protein | CI641_006930 | Not Available | Negative | 1448081 - 1448626 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | CI641_006935 | Not Available | Positive | 1448694 - 1449542 | 32559.2 |
| nucleotide 5'-monophosphate nucleosidase | CI641_006940 | Not Available | Positive | 1449654 - 1451018 | 50975.0 |
| haaap family serine/threonine permease | CI641_006945 | Not Available | Positive | 1451575 - 1452864 | 46909.2 |
| l-serine ammonia-lyase | CI641_006950 | Not Available | Positive | 1452922 - 1454289 | 48724.8 |
| flap endonuclease xni | CI641_006955 | Not Available | Positive | 1454401 - 1455156 | 28167.7 |
| lactaldehyde reductase | CI641_006960 | Not Available | Negative | 1455211 - 1456359 | 40515.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





