Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber assembly protein | CI641_024020 | Not Available | Positive | 4929055 - 4929465 | 14809.2 |
| Dna invertase | CI641_024025 | Not Available | Negative | 4929607 - 4929773 | 6209.49 |
| Lydc | CI641_024030 | Not Available | Positive | 4929901 - 4930182 | 10504.0 |
| Lysis determining protein lyda | CI641_024035 | Not Available | Positive | 4930250 - 4930579 | 11467.2 |
| Lysis determining protein lydb | CI641_024040 | Not Available | Positive | 4930576 - 4931019 | 17197.8 |
| Conserved protein of unknown function hdf | CI641_024045 | Not Available | Positive | 4931006 - 4931608 | 21787.2 |
| Dara | CI641_024050 | Not Available | Positive | 4931610 - 4933529 | 69543.9 |
| Ddra | CI641_024055 | Not Available | Positive | 4933526 - 4933891 | 13030.3 |
| Hypothetical protein | CI641_024060 | Not Available | Positive | 4933904 - 4936891 | 108678.0 |
| Hxr | CI641_024065 | Not Available | Positive | 4936881 - 4937189 | 10977.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





