Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv toxin-antitoxin system toxin cbta | CI641_006210 | Not Available | Positive | 1303603 - 1303980 | 13910.7 |
| hypothetical protein | CI641_006215 | Not Available | Positive | 1303977 - 1304465 | 17924.3 |
| duf957 domain-containing protein | CI641_006220 | Not Available | Positive | 1304477 - 1304674 | 7513.8 |
| duf4942 domain-containing protein | CI641_006225 | Not Available | Positive | 1304759 - 1305604 | 32541.9 |
| Trna-met | Not Available | Not Available | Positive | 1305704 - 1305779 | Not Available |
| hypothetical protein | CI641_006235 | Not Available | Positive | 1306339 - 1308591 | 85119.1 |
| carbon starvation induced protein csid | CI641_006240 | Not Available | Positive | 1308927 - 1309904 | 37386.6 |
| l-2-hydroxyglutarate oxidase | CI641_006245 | Not Available | Positive | 1309923 - 1311191 | 46014.6 |
| nadp-dependent succinate-semialdehyde dehydrogenase | CI641_006250 | Not Available | Positive | 1311214 - 1312662 | 51793.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | CI641_006255 | Not Available | Positive | 1312676 - 1313956 | 45693.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





