Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4102 domain-containing protein | CI641_006035 | Not Available | Positive | 1265801 - 1267117 | 50378.6 |
| hypothetical protein | CI641_006040 | Not Available | Positive | 1267247 - 1267843 | 22060.2 |
| hypothetical protein | CI641_006045 | Not Available | Negative | 1267930 - 1269552 | 63302.2 |
| alpa family phage regulatory protein | CI641_006050 | Not Available | Positive | 1270259 - 1270486 | 8968.01 |
| duf3987 domain-containing protein | CI641_006055 | Not Available | Positive | 1270592 - 1270819 | 8098.74 |
| duf3987 domain-containing protein | CI641_006060 | Not Available | Positive | 1271068 - 1272501 | 54182.2 |
| inovirus gp2 family protein | CI641_006065 | Not Available | Positive | 1273390 - 1273953 | 22256.6 |
| is3 family transposase | CI641_006075 | Not Available | Negative | 1274455 - 1275728 | 48118.0 |
| inovirus gp2 family protein | CI641_006080 | Not Available | Positive | 1275818 - 1276018 | 7533.07 |
| inovirus gp2 family protein | CI641_006085 | Not Available | Positive | 1276049 - 1276381 | 12862.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





