Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | CI641_005935 | Not Available | Negative | 1245702 - 1246469 | 28424.0 |
| ribosome maturation factor rimm | CI641_005940 | Not Available | Negative | 1246500 - 1247048 | 20572.5 |
| 30s ribosomal protein s16 | CI641_005945 | Not Available | Negative | 1247067 - 1247315 | 9191.08 |
| signal recognition particle protein | CI641_005950 | Not Available | Negative | 1247452 - 1248813 | 49790.5 |
| inner membrane protein ypjd | CI641_005955 | Not Available | Positive | 1248980 - 1249771 | 29263.9 |
| duf21 domain-containing protein | CI641_005960 | Not Available | Positive | 1249792 - 1251078 | 48047.2 |
| cytoplasmic protein | CI641_005965 | Not Available | Positive | 1251200 - 1251805 | 23155.5 |
| nucleotide exchange factor grpe | CI641_005970 | Not Available | Negative | 1251840 - 1252430 | 21742.1 |
| nad(+) kinase | CI641_005975 | Not Available | Positive | 1252553 - 1253431 | 32568.3 |
| dna repair protein recn | CI641_005980 | Not Available | Positive | 1253517 - 1255178 | 61416.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





