Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfim family lipoprotein | CI641_005835 | Not Available | Positive | 1225254 - 1225577 | 11805.9 |
| alpha-ketoglutarate permease | CI641_005840 | Not Available | Negative | 1225574 - 1226872 | 47055.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1227198 - 1227313 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1227397 - 1230324 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1230500 - 1230575 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1230735 - 1232288 | Not Available |
| atp-dependent chaperone clpb | CI641_005865 | Not Available | Negative | 1232730 - 1235303 | 95590.8 |
| polyphenol oxidase | CI641_005870 | Not Available | Negative | 1235433 - 1236164 | 26352.4 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | CI641_005875 | Not Available | Negative | 1236161 - 1237141 | 37109.8 |
| outer membrane protein assembly factor bamd | CI641_005880 | Not Available | Positive | 1237276 - 1238013 | 27830.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





