Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase srmb | CI641_005785 | Not Available | Positive | 1214022 - 1215356 | 49901.0 |
| lysr family transcriptional regulator | CI641_005790 | Not Available | Negative | 1215565 - 1216446 | 33287.2 |
| cysteine/o-acetylserine transporter | CI641_005795 | Not Available | Positive | 1216549 - 1217136 | 21249.5 |
| autonomous glycyl radical cofactor grca | CI641_005800 | Not Available | Negative | 1217192 - 1217575 | 14269.0 |
| uracil-dna glycosylase | CI641_005805 | Not Available | Positive | 1217880 - 1218569 | 25682.6 |
| trna/rrna methyltransferase | CI641_005810 | Not Available | Negative | 1218617 - 1219654 | 37786.5 |
| thioredoxin trxc | CI641_005815 | Not Available | Positive | 1219861 - 1220280 | 15555.6 |
| dtw domain-containing protein | CI641_005820 | Not Available | Positive | 1220349 - 1221047 | 25924.4 |
| protein lysine acetyltransferase | CI641_005825 | Not Available | Positive | 1221079 - 1223739 | 97917.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | CI641_005830 | Not Available | Positive | 1223853 - 1225208 | 52804.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





