Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | CI641_005435 | Not Available | Negative | 1134023 - 1135489 | 52025.6 |
| exodeoxyribonuclease vii large subunit | CI641_005440 | Not Available | Positive | 1135651 - 1137021 | 51863.4 |
| hypothetical protein | CI641_005445 | Not Available | Negative | 1137018 - 1137233 | 7901.64 |
| ribosome biogenesis gtpase der | CI641_005450 | Not Available | Negative | 1137302 - 1138774 | 55039.1 |
| outer membrane protein assembly factor bamb | CI641_005455 | Not Available | Negative | 1138892 - 1140070 | 41873.6 |
| tetratricopeptide repeat protein | CI641_005460 | Not Available | Negative | 1140081 - 1140701 | 22177.2 |
| histidine--trna ligase | CI641_005465 | Not Available | Negative | 1140719 - 1141993 | 47032.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CI641_005470 | Not Available | Negative | 1142104 - 1143222 | 40686.1 |
| cytoskeleton protein rodz | CI641_005475 | Not Available | Negative | 1143249 - 1144262 | 36176.5 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | CI641_005480 | Not Available | Negative | 1144547 - 1145701 | 43088.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





