Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | CI641_005385 | Not Available | Negative | 1121666 - 1122292 | 22534.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | CI641_005390 | Not Available | Positive | 1122617 - 1123654 | 36875.2 |
| phosphoribosylglycinamide formyltransferase | CI641_005395 | Not Available | Positive | 1123654 - 1124292 | 23253.6 |
| polyphosphate kinase 1 | CI641_005400 | Not Available | Positive | 1124463 - 1126529 | 80436.1 |
| exopolyphosphatase | CI641_005405 | Not Available | Positive | 1126534 - 1128075 | 58139.5 |
| cyclic-guanylate-specific phosphodiesterase pdef | CI641_005410 | Not Available | Negative | 1128114 - 1130357 | 85655.8 |
| duf2633 family protein | CI641_005415 | Not Available | Positive | 1130727 - 1130900 | 6856.35 |
| glycine zipper 2tm domain-containing protein | CI641_005420 | Not Available | Positive | 1131214 - 1131729 | 17574.9 |
| hypothetical protein | CI641_005425 | Not Available | Positive | 1131745 - 1132284 | 20259.5 |
| glutamine-hydrolyzing gmp synthase | CI641_005430 | Not Available | Negative | 1132377 - 1133954 | 58668.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





